Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
PDX1P52945 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.42■□□□□ 0.06
PDX1P52945 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 AC008741.2-201ENST00000612792 3115 ntBASIC15.41■□□□□ 0.06
PDX1P52945 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 CDC14C-201ENST00000428251 1719 ntBASIC15.41■□□□□ 0.06
PDX1P52945 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.41■□□□□ 0.06
PDX1P52945 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDX1P52945 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PDX1P52945 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PDX1P52945 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PDX1P52945 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.41■□□□□ 0.06
PDX1P52945 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.41■□□□□ 0.06
PDX1P52945 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.41■□□□□ 0.06
PDX1P52945 SNX29P1-201ENST00000548357 1007 ntBASIC15.41■□□□□ 0.06
PDX1P52945 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.41■□□□□ 0.06
PDX1P52945 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.41■□□□□ 0.06
PDX1P52945 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.41■□□□□ 0.06
PDX1P52945 MIR4321-201ENST00000592276 80 ntBASIC15.41■□□□□ 0.06
PDX1P52945 AC008735.3-201ENST00000596646 500 ntBASIC15.41■□□□□ 0.06
PDX1P52945 TMEM261P1-201ENST00000604899 340 ntBASIC15.41■□□□□ 0.06
PDX1P52945 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PDX1P52945 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 PCDHA1-201ENST00000378133 2726 ntBASIC15.41■□□□□ 0.06
PDX1P52945 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.41■□□□□ 0.06
PDX1P52945 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDX1P52945 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
PDX1P52945 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 AC005622.1-201ENST00000636801 1703 ntBASIC15.4■□□□□ 0.06
PDX1P52945 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 AL513523.2-202ENST00000427283 2040 ntBASIC15.4■□□□□ 0.06
PDX1P52945 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.4■□□□□ 0.06
PDX1P52945 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.4■□□□□ 0.06
PDX1P52945 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.4■□□□□ 0.06
PDX1P52945 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.4■□□□□ 0.06
PDX1P52945 AL391069.4-201ENST00000609583 481 ntBASIC15.4■□□□□ 0.06
PDX1P52945 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PDX1P52945 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 MTHFR-217ENST00000641820 1569 ntBASIC15.4■□□□□ 0.06
PDX1P52945 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms