Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 SNX18-202ENST00000343017 3140 ntBASIC14.49□□□□□ -0.09
HMGA2P52926 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGA2P52926 WASH3P-207ENST00000560956 1394 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 FO538757.1-201ENST00000623083 1397 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGA2P52926 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGA2P52926 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 AC136604.1-201ENST00000418535 575 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGA2P52926 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGA2P52926 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGA2P52926 HNRNPUP1-201ENST00000554987 333 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 PDPK2P-202ENST00000562415 1191 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 AC018845.2-201ENST00000568326 409 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 AP001005.1-201ENST00000571755 1248 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 RN7SL510P-201ENST00000581311 263 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGA2P52926 AC064836.3-201ENST00000607928 673 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 GRK6P1-201ENST00000400595 1711 ntBASIC14.48□□□□□ -0.09
HMGA2P52926 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
HMGA2P52926 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGA2P52926 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
HMGA2P52926 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGA2P52926 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HMGA2P52926 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HMGA2P52926 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 AC004870.1-201ENST00000315132 882 ntBASIC14.47□□□□□ -0.09
HMGA2P52926 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 MIR346-201ENST00000362234 95 ntBASIC14.47□□□□□ -0.09
HMGA2P52926 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 FAM8A3P-201ENST00000427218 844 ntBASIC14.47□□□□□ -0.09
HMGA2P52926 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.47□□□□□ -0.09
HMGA2P52926 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 AC034105.1-201ENST00000563488 319 ntBASIC14.47□□□□□ -0.09
HMGA2P52926 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 AC027307.2-201ENST00000591252 911 ntBASIC14.47□□□□□ -0.09
HMGA2P52926 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.47□□□□□ -0.09
HMGA2P52926 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms