Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLCN2P51788 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CLCN2P51788 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 KRT18P34-201ENST00000488218 1270 ntBASIC15.45■□□□□ 0.06
CLCN2P51788 AC079140.1-201ENST00000508039 487 ntBASIC15.45■□□□□ 0.06
CLCN2P51788 KRT8P48-201ENST00000515599 1220 ntBASIC15.45■□□□□ 0.06
CLCN2P51788 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.45■□□□□ 0.06
CLCN2P51788 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLCN2P51788 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.45■□□□□ 0.06
CLCN2P51788 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.45■□□□□ 0.06
CLCN2P51788 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 AC013726.1-201ENST00000563747 2285 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.44■□□□□ 0.06
CLCN2P51788 AL592309.1-201ENST00000443127 649 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 IGHV3-62-201ENST00000520057 340 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 AC243562.1-201ENST00000560672 389 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.44■□□□□ 0.06
CLCN2P51788 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 AC020765.3-201ENST00000613051 740 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.44■□□□□ 0.06
CLCN2P51788 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CLCN2P51788 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.44■□□□□ 0.06
CLCN2P51788 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.44■□□□□ 0.06
CLCN2P51788 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.44■□□□□ 0.06
CLCN2P51788 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLCN2P51788 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.43■□□□□ 0.06
CLCN2P51788 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CLCN2P51788 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms