Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
HCFC1P51610 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HCFC1P51610 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 DRD5P1-201ENST00000456605 1438 ntBASIC13.74□□□□□ -0.21
HCFC1P51610 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 MIR326-201ENST00000362220 95 ntBASIC13.74□□□□□ -0.21
HCFC1P51610 AL133267.1-201ENST00000398220 340 ntBASIC13.74□□□□□ -0.21
HCFC1P51610 C1QBPP1-201ENST00000400117 770 ntBASIC13.74□□□□□ -0.21
HCFC1P51610 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.74□□□□□ -0.21
HCFC1P51610 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.74□□□□□ -0.21
HCFC1P51610 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 AL450472.2-201ENST00000603663 1156 ntBASIC13.74□□□□□ -0.21
HCFC1P51610 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCFC1P51610 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.74□□□□□ -0.21
HCFC1P51610 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HCFC1P51610 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HCFC1P51610 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 CALR4P-201ENST00000431943 946 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.73□□□□□ -0.21
HCFC1P51610 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.73□□□□□ -0.21
HCFC1P51610 AC000095.1-201ENST00000603208 874 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 AC093813.1-201ENST00000605066 256 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 PCDHA1-201ENST00000378133 2726 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
HCFC1P51610 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HCFC1P51610 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 YBX1P6-201ENST00000442962 1002 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
HCFC1P51610 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 KRT18P43-201ENST00000469825 1281 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.73□□□□□ -0.21
HCFC1P51610 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.73□□□□□ -0.21
HCFC1P51610 CLUHP6-201ENST00000580789 941 ntBASIC13.73□□□□□ -0.21
HCFC1P51610 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.73□□□□□ -0.21
HCFC1P51610 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HCFC1P51610 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HCFC1P51610 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.72□□□□□ -0.21
HCFC1P51610 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HCFC1P51610 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
HCFC1P51610 HAUS4P1-201ENST00000406739 1145 ntBASIC13.72□□□□□ -0.21
HCFC1P51610 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.72□□□□□ -0.21
HCFC1P51610 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HCFC1P51610 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms