Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.5□□□□□ -0.09
CENPAP49450 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.5□□□□□ -0.09
CENPAP49450 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.5□□□□□ -0.09
CENPAP49450 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.5□□□□□ -0.09
CENPAP49450 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 AL078644.1-201ENST00000609881 752 ntBASIC14.5□□□□□ -0.09
CENPAP49450 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.5□□□□□ -0.09
CENPAP49450 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 AC008677.1-201ENST00000519230 1561 ntBASIC14.5□□□□□ -0.09
CENPAP49450 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.5□□□□□ -0.09
CENPAP49450 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CENPAP49450 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.5□□□□□ -0.09
CENPAP49450 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CENPAP49450 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.49□□□□□ -0.09
CENPAP49450 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.49□□□□□ -0.09
CENPAP49450 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.49□□□□□ -0.09
CENPAP49450 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.49□□□□□ -0.09
CENPAP49450 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.49□□□□□ -0.09
CENPAP49450 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.49□□□□□ -0.09
CENPAP49450 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 AC022532.1-201ENST00000624563 1728 ntBASIC14.49□□□□□ -0.09
CENPAP49450 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.49□□□□□ -0.09
CENPAP49450 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CENPAP49450 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CENPAP49450 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CENPAP49450 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CENPAP49450 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CENPAP49450 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CENPAP49450 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 AL590627.1-203ENST00000421194 1026 ntBASIC14.48□□□□□ -0.09
CENPAP49450 AC092474.2-201ENST00000424288 719 ntBASIC14.48□□□□□ -0.09
CENPAP49450 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 AC140658.5-201ENST00000438532 169 ntBASIC14.48□□□□□ -0.09
CENPAP49450 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.48□□□□□ -0.09
CENPAP49450 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.48□□□□□ -0.09
CENPAP49450 KRT19P2-202ENST00000557173 1012 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms