Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNNI2P48788 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TNNI2P48788 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNNI2P48788 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNNI2P48788 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNNI2P48788 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TNNI2P48788 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
TNNI2P48788 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNNI2P48788 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.77■□□□□ 0.6
TNNI2P48788 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.77■□□□□ 0.6
TNNI2P48788 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.77■□□□□ 0.6
TNNI2P48788 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TNNI2P48788 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.77■□□□□ 0.6
TNNI2P48788 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
TNNI2P48788 FTH1P14-201ENST00000482930 551 ntBASIC18.77■□□□□ 0.6
TNNI2P48788 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.77■□□□□ 0.6
TNNI2P48788 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TNNI2P48788 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 HNRNPUP1-201ENST00000554987 333 ntBASIC18.77■□□□□ 0.6
TNNI2P48788 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
TNNI2P48788 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.77■□□□□ 0.6
TNNI2P48788 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TNNI2P48788 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNNI2P48788 KRT8P44-201ENST00000441609 1350 ntBASIC18.77■□□□□ 0.6
TNNI2P48788 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNNI2P48788 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNNI2P48788 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNNI2P48788 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNNI2P48788 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TNNI2P48788 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 KRT18P43-201ENST00000469825 1281 ntBASIC18.76■□□□□ 0.59
TNNI2P48788 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 AL606495.2-201ENST00000605867 535 ntBASIC18.76■□□□□ 0.59
TNNI2P48788 MIR6787-201ENST00000616675 61 ntBASIC18.76■□□□□ 0.59
TNNI2P48788 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TNNI2P48788 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.76■□□□□ 0.59
TNNI2P48788 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNNI2P48788 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.76■□□□□ 0.59
TNNI2P48788 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.75■□□□□ 0.59
TNNI2P48788 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TNNI2P48788 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TNNI2P48788 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 AC134407.2-201ENST00000625089 1978 ntBASIC18.75■□□□□ 0.59
TNNI2P48788 AC084018.2-201ENST00000613093 2607 ntBASIC18.75■□□□□ 0.59
TNNI2P48788 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.75■□□□□ 0.59
TNNI2P48788 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNNI2P48788 YBX1P6-201ENST00000442962 1002 ntBASIC18.75■□□□□ 0.59
TNNI2P48788 AC093433.1-201ENST00000458048 571 ntBASIC18.75■□□□□ 0.59
TNNI2P48788 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.75■□□□□ 0.59
TNNI2P48788 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TNNI2P48788 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms