Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GRIA4P48058 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.28■□□□□ 0.2
GRIA4P48058 MTND6P24-201ENST00000440466 518 ntBASIC16.28■□□□□ 0.2
GRIA4P48058 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.28■□□□□ 0.2
GRIA4P48058 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 AC026979.3-201ENST00000607315 403 ntBASIC16.28■□□□□ 0.2
GRIA4P48058 RN7SL828P-201ENST00000607615 303 ntBASIC16.28■□□□□ 0.2
GRIA4P48058 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GRIA4P48058 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GRIA4P48058 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GRIA4P48058 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.27■□□□□ 0.2
GRIA4P48058 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GRIA4P48058 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
GRIA4P48058 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GRIA4P48058 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.27■□□□□ 0.2
GRIA4P48058 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GRIA4P48058 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GRIA4P48058 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.27■□□□□ 0.2
GRIA4P48058 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.27■□□□□ 0.2
GRIA4P48058 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.27■□□□□ 0.2
GRIA4P48058 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.27■□□□□ 0.2
GRIA4P48058 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GRIA4P48058 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.27■□□□□ 0.2
GRIA4P48058 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.27■□□□□ 0.2
GRIA4P48058 AL844908.2-201ENST00000609461 460 ntBASIC16.27■□□□□ 0.2
GRIA4P48058 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GRIA4P48058 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.27■□□□□ 0.2
GRIA4P48058 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GRIA4P48058 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRIA4P48058 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GRIA4P48058 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.27■□□□□ 0.19
GRIA4P48058 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GRIA4P48058 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 AP005117.1-202ENST00000581724 1908 ntBASIC16.27■□□□□ 0.19
GRIA4P48058 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
GRIA4P48058 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.27■□□□□ 0.19
GRIA4P48058 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.26■□□□□ 0.19
GRIA4P48058 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA4P48058 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.26■□□□□ 0.19
GRIA4P48058 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA4P48058 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GRIA4P48058 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GRIA4P48058 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA4P48058 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA4P48058 CDC14C-201ENST00000428251 1719 ntBASIC16.26■□□□□ 0.19
GRIA4P48058 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GRIA4P48058 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms