Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NR4A2P43354 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NR4A2P43354 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NR4A2P43354 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
NR4A2P43354 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR4A2P43354 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NR4A2P43354 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 AC005912.2-201ENST00000619492 2400 ntBASIC14.54□□□□□ -0.08
NR4A2P43354 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.54□□□□□ -0.08
NR4A2P43354 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
NR4A2P43354 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.54□□□□□ -0.08
NR4A2P43354 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.54□□□□□ -0.08
NR4A2P43354 AC018845.2-201ENST00000568326 409 ntBASIC14.54□□□□□ -0.08
NR4A2P43354 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 GGTLC5P-201ENST00000617623 998 ntBASIC14.54□□□□□ -0.08
NR4A2P43354 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NR4A2P43354 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 AC092865.6-201ENST00000642101 219 ntBASIC14.54□□□□□ -0.08
NR4A2P43354 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 GGT3P-204ENST00000453783 1664 ntBASIC14.54□□□□□ -0.08
NR4A2P43354 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.54□□□□□ -0.08
NR4A2P43354 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NR4A2P43354 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.53□□□□□ -0.08
NR4A2P43354 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NR4A2P43354 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.53□□□□□ -0.08
NR4A2P43354 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.53□□□□□ -0.08
NR4A2P43354 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NR4A2P43354 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms