Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN3P26045 AC127383.1-201ENST00000444697 1800 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 TMBIM7P-203ENST00000641617 1718 ntBASIC16.19■□□□□ 0.18
PTPN3P26045 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN3P26045 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PTPN3P26045 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN3P26045 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PTPN3P26045 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN3P26045 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN3P26045 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 AL589739.1-201ENST00000607720 493 ntBASIC16.18■□□□□ 0.18
PTPN3P26045 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.18■□□□□ 0.18
PTPN3P26045 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 LINC00554-201ENST00000564841 3011 ntBASIC16.18■□□□□ 0.18
PTPN3P26045 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN3P26045 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
PTPN3P26045 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN3P26045 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 AL080243.2-201ENST00000418783 582 ntBASIC16.17■□□□□ 0.18
PTPN3P26045 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.17■□□□□ 0.18
PTPN3P26045 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.17■□□□□ 0.18
PTPN3P26045 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN3P26045 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN3P26045 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN3P26045 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN3P26045 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms