Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.64□□□□□ -0.23
TNFSF4P23510 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TNFSF4P23510 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 AC138969.2-201ENST00000532739 9932 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TNFSF4P23510 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 FO393414.2-201ENST00000405153 598 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 SPDYE17-201ENST00000412399 783 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 RN7SL618P-201ENST00000477850 296 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 AC097493.3-201ENST00000509725 367 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 BANF1P1-201ENST00000553684 263 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.63□□□□□ -0.23
TNFSF4P23510 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.63□□□□□ -0.23
TNFSF4P23510 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 AL133215.2-201ENST00000609242 977 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.63□□□□□ -0.23
TNFSF4P23510 KRT8P37-201ENST00000451609 1420 ntBASIC13.63□□□□□ -0.23
TNFSF4P23510 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.63□□□□□ -0.23
TNFSF4P23510 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TNFSF4P23510 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
TNFSF4P23510 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.62□□□□□ -0.23
TNFSF4P23510 AL136982.4-201ENST00000437689 1740 ntBASIC13.62□□□□□ -0.23
TNFSF4P23510 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.62□□□□□ -0.23
TNFSF4P23510 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TNFSF4P23510 INGX-202ENST00000489074 768 ntBASIC13.62□□□□□ -0.23
TNFSF4P23510 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.62□□□□□ -0.23
TNFSF4P23510 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.62□□□□□ -0.23
TNFSF4P23510 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.62□□□□□ -0.23
TNFSF4P23510 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
TNFSF4P23510 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TNFSF4P23510 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms