Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RAB4AP20338 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
RAB4AP20338 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 AL021920.2-201ENST00000624828 1351 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
RAB4AP20338 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.27□□□□□ -0.45
RAB4AP20338 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB4AP20338 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB4AP20338 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 TSPY7P-201ENST00000431358 1114 ntBASIC12.26□□□□□ -0.45
RAB4AP20338 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.26□□□□□ -0.45
RAB4AP20338 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 AC073912.3-201ENST00000624414 853 ntBASIC12.26□□□□□ -0.45
RAB4AP20338 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.26□□□□□ -0.45
RAB4AP20338 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
RAB4AP20338 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RAB4AP20338 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.25□□□□□ -0.45
RAB4AP20338 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB4AP20338 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB4AP20338 AL353593.2-201ENST00000602529 1483 ntBASIC12.25□□□□□ -0.45
RAB4AP20338 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB4AP20338 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms