Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH1P12830 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH1P12830 AL136982.4-201ENST00000437689 1740 ntBASIC15.53■□□□□ 0.08
CDH1P12830 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDH1P12830 AP003680.1-201ENST00000598970 3660 ntBASIC15.53■□□□□ 0.08
CDH1P12830 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH1P12830 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH1P12830 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH1P12830 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH1P12830 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH1P12830 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH1P12830 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 AL691432.1-201ENST00000596308 1422 ntBASIC15.52■□□□□ 0.08
CDH1P12830 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH1P12830 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDH1P12830 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.52■□□□□ 0.08
CDH1P12830 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH1P12830 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 AC243562.2-201ENST00000561247 970 ntBASIC15.52■□□□□ 0.08
CDH1P12830 MIR4453-201ENST00000584019 89 ntBASIC15.52■□□□□ 0.08
CDH1P12830 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH1P12830 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH1P12830 AC026979.3-201ENST00000607315 403 ntBASIC15.52■□□□□ 0.08
CDH1P12830 GPALPP1-207ENST00000611650 899 ntBASIC15.52■□□□□ 0.08
CDH1P12830 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH1P12830 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH1P12830 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH1P12830 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDH1P12830 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH1P12830 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CDH1P12830 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDH1P12830 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH1P12830 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH1P12830 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.52■□□□□ 0.07
CDH1P12830 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.52■□□□□ 0.07
CDH1P12830 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH1P12830 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH1P12830 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 NORAD-201ENST00000565493 5339 ntBASIC15.51■□□□□ 0.07
CDH1P12830 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH1P12830 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH1P12830 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.51■□□□□ 0.07
CDH1P12830 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH1P12830 AL139010.1-201ENST00000454878 894 ntBASIC15.51■□□□□ 0.07
CDH1P12830 HLA-J-203ENST00000494367 1087 ntBASIC15.51■□□□□ 0.07
CDH1P12830 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH1P12830 AC004449.1-201ENST00000564240 433 ntBASIC15.51■□□□□ 0.07
CDH1P12830 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH1P12830 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH1P12830 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 AC023157.3-201ENST00000619086 2088 ntBASIC15.51■□□□□ 0.07
CDH1P12830 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CDH1P12830 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH1P12830 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH1P12830 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH1P12830 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH1P12830 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH1P12830 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CDH1P12830 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH1P12830 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms