Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC092127.1-201ENST00000567093 3455 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC018892.3-201ENST00000623986 2499 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 MIR940-201ENST00000401276 94 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC004832.2-201ENST00000426397 482 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 KRT18P58-201ENST00000527480 1120 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 MTDHP5-201ENST00000598980 586 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AL450472.2-201ENST00000603663 1156 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AC084121.4-201ENST00000641598 221 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 AF228730.8-201ENST00000642140 221 ntBASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HNRNPCL4P0DMR1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 KRT8P37-201ENST00000451609 1420 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 PHKG1P2-201ENST00000457537 863 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 AL109954.1-202ENST00000564051 2148 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 AC006486.2-201ENST00000624246 2199 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 AC023824.1-201ENST00000562945 2975 ntBASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
HNRNPCL4P0DMR1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HNRNPCL4P0DMR1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HNRNPCL4P0DMR1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.78□□□□□ -0.04
HNRNPCL4P0DMR1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms