Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 AC063926.3-201ENST00000624734 5658 ntBASIC17.41■□□□□ 0.38
CLTAP09496 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLTAP09496 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.41■□□□□ 0.38
CLTAP09496 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.41■□□□□ 0.38
CLTAP09496 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLTAP09496 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CLTAP09496 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.41■□□□□ 0.38
CLTAP09496 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.41■□□□□ 0.38
CLTAP09496 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.41■□□□□ 0.38
CLTAP09496 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLTAP09496 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
CLTAP09496 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLTAP09496 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 DBET-201ENST00000630918 3363 ntBASIC17.4■□□□□ 0.38
CLTAP09496 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CLTAP09496 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.4■□□□□ 0.38
CLTAP09496 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.4■□□□□ 0.38
CLTAP09496 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.4■□□□□ 0.38
CLTAP09496 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.4■□□□□ 0.38
CLTAP09496 MIR3197-201ENST00000582241 73 ntBASIC17.4■□□□□ 0.38
CLTAP09496 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.4■□□□□ 0.38
CLTAP09496 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLTAP09496 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 AC134407.2-201ENST00000625089 1978 ntBASIC17.4■□□□□ 0.38
CLTAP09496 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLTAP09496 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLTAP09496 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.39■□□□□ 0.38
CLTAP09496 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLTAP09496 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.39■□□□□ 0.38
CLTAP09496 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.39■□□□□ 0.37
CLTAP09496 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.39■□□□□ 0.37
CLTAP09496 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.39■□□□□ 0.37
CLTAP09496 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLTAP09496 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 AC069224.1-201ENST00000566372 1715 ntBASIC17.39■□□□□ 0.37
CLTAP09496 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.39■□□□□ 0.37
CLTAP09496 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLTAP09496 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.39■□□□□ 0.37
CLTAP09496 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLTAP09496 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 FAM207CP-201ENST00000443486 507 ntBASIC17.39■□□□□ 0.37
CLTAP09496 SDHAP3-202ENST00000515467 728 ntBASIC17.39■□□□□ 0.37
CLTAP09496 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.39■□□□□ 0.37
CLTAP09496 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.39■□□□□ 0.37
CLTAP09496 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.39■□□□□ 0.37
CLTAP09496 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLTAP09496 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms