Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.64□□□□□ -0.07
THBS1P07996 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
THBS1P07996 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 AC006486.2-201ENST00000624246 2199 ntBASIC14.63□□□□□ -0.07
THBS1P07996 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 AC004461.1-201ENST00000412461 403 ntBASIC14.63□□□□□ -0.07
THBS1P07996 AC136604.1-201ENST00000418535 575 ntBASIC14.63□□□□□ -0.07
THBS1P07996 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 AL645939.2-201ENST00000427340 991 ntBASIC14.63□□□□□ -0.07
THBS1P07996 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.63□□□□□ -0.07
THBS1P07996 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.63□□□□□ -0.07
THBS1P07996 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.63□□□□□ -0.07
THBS1P07996 SNHG9-202ENST00000564014 471 ntBASIC14.63□□□□□ -0.07
THBS1P07996 AC105021.1-202ENST00000570572 669 ntBASIC14.63□□□□□ -0.07
THBS1P07996 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.63□□□□□ -0.07
THBS1P07996 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
THBS1P07996 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 AC097359.3-201ENST00000603982 1210 ntBASIC14.63□□□□□ -0.07
THBS1P07996 LINC02084-201ENST00000606069 1096 ntBASIC14.63□□□□□ -0.07
THBS1P07996 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 AC127383.1-201ENST00000444697 1800 ntBASIC14.63□□□□□ -0.07
THBS1P07996 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.63□□□□□ -0.07
THBS1P07996 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
THBS1P07996 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
THBS1P07996 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
THBS1P07996 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.62□□□□□ -0.07
THBS1P07996 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 FAM58DP-201ENST00000428076 619 ntBASIC14.62□□□□□ -0.07
THBS1P07996 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.62□□□□□ -0.07
THBS1P07996 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.62□□□□□ -0.07
THBS1P07996 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
THBS1P07996 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.62□□□□□ -0.07
THBS1P07996 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms