Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CTSDP07339 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CTSDP07339 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.23□□□□□ -0.29
CTSDP07339 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 CXCL1P1-201ENST00000502804 216 ntBASIC13.23□□□□□ -0.29
CTSDP07339 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.23□□□□□ -0.29
CTSDP07339 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.23□□□□□ -0.29
CTSDP07339 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.23□□□□□ -0.29
CTSDP07339 AL078644.1-201ENST00000609881 752 ntBASIC13.23□□□□□ -0.29
CTSDP07339 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 SBF1P1-201ENST00000444527 5631 ntBASIC13.23□□□□□ -0.29
CTSDP07339 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CTSDP07339 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CTSDP07339 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.22□□□□□ -0.29
CTSDP07339 TSPY19P-201ENST00000418461 509 ntBASIC13.22□□□□□ -0.29
CTSDP07339 TSPY18P-201ENST00000441642 509 ntBASIC13.22□□□□□ -0.29
CTSDP07339 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.22□□□□□ -0.29
CTSDP07339 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.22□□□□□ -0.29
CTSDP07339 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.22□□□□□ -0.29
CTSDP07339 OR7E14P-202ENST00000530490 1290 ntBASIC13.22□□□□□ -0.29
CTSDP07339 AC109635.5-201ENST00000533593 962 ntBASIC13.22□□□□□ -0.29
CTSDP07339 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.22□□□□□ -0.29
CTSDP07339 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 MIR4313-201ENST00000580760 101 ntBASIC13.22□□□□□ -0.29
CTSDP07339 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.22□□□□□ -0.29
CTSDP07339 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.22□□□□□ -0.29
CTSDP07339 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 REXO1L6P-202ENST00000619970 1078 ntBASIC13.22□□□□□ -0.29
CTSDP07339 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CTSDP07339 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CTSDP07339 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms