Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.97■□□□□ 0.15
APOA4P06727 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.97■□□□□ 0.15
APOA4P06727 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.97■□□□□ 0.15
APOA4P06727 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
APOA4P06727 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.97■□□□□ 0.15
APOA4P06727 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
APOA4P06727 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
APOA4P06727 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
APOA4P06727 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.97■□□□□ 0.15
APOA4P06727 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.97■□□□□ 0.15
APOA4P06727 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
APOA4P06727 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
APOA4P06727 AL109954.1-202ENST00000564051 2148 ntBASIC15.97■□□□□ 0.15
APOA4P06727 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.97■□□□□ 0.15
APOA4P06727 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
APOA4P06727 AC023824.1-201ENST00000562945 2975 ntBASIC15.96■□□□□ 0.15
APOA4P06727 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 AC092850.2-201ENST00000623821 2697 ntBASIC15.96■□□□□ 0.15
APOA4P06727 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.96■□□□□ 0.15
APOA4P06727 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 CNN2P11-201ENST00000429351 262 ntBASIC15.96■□□□□ 0.15
APOA4P06727 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
APOA4P06727 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
APOA4P06727 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.96■□□□□ 0.15
APOA4P06727 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
APOA4P06727 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
APOA4P06727 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
APOA4P06727 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
APOA4P06727 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
APOA4P06727 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
APOA4P06727 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.95■□□□□ 0.14
APOA4P06727 AP003680.1-201ENST00000598970 3660 ntBASIC15.95■□□□□ 0.14
APOA4P06727 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
APOA4P06727 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms