Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 AC024909.3-201ENST00000611513 2257 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.55□□□□□ -0.4
TRGV3P03979 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 AC004987.2-201ENST00000395959 1148 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 AC107890.1-201ENST00000422478 521 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 AL645939.2-201ENST00000427340 991 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.55□□□□□ -0.4
TRGV3P03979 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.55□□□□□ -0.4
TRGV3P03979 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.55□□□□□ -0.4
TRGV3P03979 AC106028.4-201ENST00000614509 607 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 AC134407.2-201ENST00000625089 1978 ntBASIC12.55□□□□□ -0.4
TRGV3P03979 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.55□□□□□ -0.4
TRGV3P03979 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.55□□□□□ -0.4
TRGV3P03979 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRGV3P03979 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRGV3P03979 CETN4P-206ENST00000642099 2168 ntBASIC12.54□□□□□ -0.4
TRGV3P03979 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
TRGV3P03979 AC022188.1-201ENST00000620960 1664 ntBASIC12.54□□□□□ -0.4
TRGV3P03979 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 CDC14C-201ENST00000428251 1719 ntBASIC12.54□□□□□ -0.4
TRGV3P03979 AL136982.4-201ENST00000437689 1740 ntBASIC12.54□□□□□ -0.4
TRGV3P03979 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV3P03979 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV3P03979 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRGV3P03979 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV3P03979 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRGV3P03979 PMS2P2-201ENST00000425039 1128 ntBASIC12.54□□□□□ -0.4
TRGV3P03979 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV3P03979 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV3P03979 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms