Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 AC073389.1-201ENST00000595595 795 ntBASIC14.14□□□□□ -0.15
APOC1P02654 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
APOC1P02654 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.14□□□□□ -0.15
APOC1P02654 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
APOC1P02654 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
APOC1P02654 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.13□□□□□ -0.15
APOC1P02654 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.13□□□□□ -0.15
APOC1P02654 RN7SL589P-201ENST00000481268 310 ntBASIC14.13□□□□□ -0.15
APOC1P02654 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.13□□□□□ -0.15
APOC1P02654 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC1P02654 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC1P02654 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC1P02654 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
APOC1P02654 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 MYO15B-237ENST00000642007 4893 ntBASIC14.12□□□□□ -0.15
APOC1P02654 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.12□□□□□ -0.15
APOC1P02654 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.12□□□□□ -0.15
APOC1P02654 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 AC120114.3-201ENST00000611923 658 ntBASIC14.12□□□□□ -0.15
APOC1P02654 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 AC126177.1-201ENST00000547829 2218 ntBASIC14.12□□□□□ -0.15
APOC1P02654 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
APOC1P02654 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
APOC1P02654 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC1P02654 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC1P02654 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC1P02654 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms