Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 AC009477.1-201ENST00000452936 217 ntBASIC17.05■□□□□ 0.32
HLA-DRAP01903 AC004890.2-204ENST00000481968 304 ntBASIC17.05■□□□□ 0.32
HLA-DRAP01903 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DRAP01903 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DRAP01903 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 SDHAP3-202ENST00000515467 728 ntBASIC17.04■□□□□ 0.32
HLA-DRAP01903 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AC009407.1-201ENST00000568958 598 ntBASIC17.04■□□□□ 0.32
HLA-DRAP01903 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DRAP01903 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
HLA-DRAP01903 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DRAP01903 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DRAP01903 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 BASP1P1-201ENST00000430708 665 ntBASIC17.03■□□□□ 0.32
HLA-DRAP01903 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 ZNF890P-202ENST00000530367 1156 ntBASIC17.03■□□□□ 0.32
HLA-DRAP01903 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 LINC01115-203ENST00000606068 577 ntBASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC074044.1-201ENST00000609673 707 ntBASIC17.03■□□□□ 0.32
HLA-DRAP01903 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DRAP01903 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DRAP01903 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DRAP01903 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms