Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 MMP23A-201ENST00000234610 1017 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 FAM8A6P-201ENST00000407496 1135 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK1BO75841 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK1BO75841 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.86□□□□□ -0.19
UPK1BO75841 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 FITM1-202ENST00000559294 800 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UPK1BO75841 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 AL139385.1-201ENST00000611744 3272 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 AL591122.2-201ENST00000624125 1853 ntBASIC13.86□□□□□ -0.19
UPK1BO75841 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UPK1BO75841 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.86□□□□□ -0.19
UPK1BO75841 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UPK1BO75841 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.85□□□□□ -0.19
UPK1BO75841 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.85□□□□□ -0.19
UPK1BO75841 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 MIR662-201ENST00000384847 95 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 AL020989.1-201ENST00000422979 469 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.85□□□□□ -0.19
UPK1BO75841 RBM17P1-201ENST00000453646 1190 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 AC128688.1-201ENST00000487626 519 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 EGLN1P1-201ENST00000531623 762 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.85□□□□□ -0.19
UPK1BO75841 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UPK1BO75841 ACE3P-201ENST00000423435 1973 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.85□□□□□ -0.19
UPK1BO75841 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1BO75841 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1BO75841 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1BO75841 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1BO75841 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms