Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 AC112504.1-201ENST00000623415 1841 ntBASIC16.01■□□□□ 0.15
GPC4O75487 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 AC093520.2-201ENST00000561830 333 ntBASIC16.01■□□□□ 0.15
GPC4O75487 AC134684.3-201ENST00000641758 218 ntBASIC16.01■□□□□ 0.15
GPC4O75487 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.01■□□□□ 0.15
GPC4O75487 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GPC4O75487 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.01■□□□□ 0.15
GPC4O75487 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
GPC4O75487 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16■□□□□ 0.15
GPC4O75487 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
GPC4O75487 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 AC254562.1-201ENST00000417586 456 ntBASIC16■□□□□ 0.15
GPC4O75487 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16■□□□□ 0.15
GPC4O75487 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16■□□□□ 0.15
GPC4O75487 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16■□□□□ 0.15
GPC4O75487 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 AL365330.1-201ENST00000607459 531 ntBASIC16■□□□□ 0.15
GPC4O75487 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16■□□□□ 0.15
GPC4O75487 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16■□□□□ 0.15
GPC4O75487 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16■□□□□ 0.15
GPC4O75487 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GPC4O75487 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.99■□□□□ 0.15
GPC4O75487 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.99■□□□□ 0.15
GPC4O75487 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.99■□□□□ 0.15
GPC4O75487 AL627223.1-201ENST00000416693 442 ntBASIC15.99■□□□□ 0.15
GPC4O75487 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.99■□□□□ 0.15
GPC4O75487 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.99■□□□□ 0.15
GPC4O75487 AC004967.1-201ENST00000453589 447 ntBASIC15.99■□□□□ 0.15
GPC4O75487 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
GPC4O75487 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 AC004835.2-201ENST00000603762 682 ntBASIC15.99■□□□□ 0.15
GPC4O75487 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
GPC4O75487 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GPC4O75487 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GPC4O75487 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.99■□□□□ 0.15
GPC4O75487 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.99■□□□□ 0.15
GPC4O75487 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GPC4O75487 AC073347.1-201ENST00000421633 2643 ntBASIC15.98■□□□□ 0.15
GPC4O75487 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.98■□□□□ 0.15
GPC4O75487 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
GPC4O75487 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC4O75487 AP003680.1-201ENST00000598970 3660 ntBASIC15.98■□□□□ 0.15
GPC4O75487 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
GPC4O75487 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms