Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCL13O43927 AC004233.3-201ENST00000607794 1269 ntBASIC14.21□□□□□ -0.13
CXCL13O43927 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.21□□□□□ -0.13
CXCL13O43927 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CXCL13O43927 Z97205.2-201ENST00000564697 1639 ntBASIC14.21□□□□□ -0.13
CXCL13O43927 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL13O43927 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CXCL13O43927 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.21□□□□□ -0.14
CXCL13O43927 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.21□□□□□ -0.14
CXCL13O43927 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
CXCL13O43927 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL13O43927 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 GNAQP1-201ENST00000444815 1067 ntBASIC14.2□□□□□ -0.14
CXCL13O43927 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 TIMM17BP1-201ENST00000545713 516 ntBASIC14.2□□□□□ -0.14
CXCL13O43927 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.2□□□□□ -0.14
CXCL13O43927 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.2□□□□□ -0.14
CXCL13O43927 LINC01115-203ENST00000606068 577 ntBASIC14.2□□□□□ -0.14
CXCL13O43927 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.2□□□□□ -0.14
CXCL13O43927 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CXCL13O43927 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 AL607033.1-201ENST00000623900 1599 ntBASIC14.2□□□□□ -0.14
CXCL13O43927 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL13O43927 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL13O43927 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL13O43927 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL13O43927 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CXCL13O43927 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL13O43927 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms