Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF1O43189 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
PHF1O43189 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF1O43189 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 NME2P1-201ENST00000426182 414 ntBASIC13.83□□□□□ -0.2
PHF1O43189 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 RN7SL692P-201ENST00000464677 288 ntBASIC13.83□□□□□ -0.2
PHF1O43189 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.83□□□□□ -0.2
PHF1O43189 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 AC013467.2-201ENST00000605472 835 ntBASIC13.83□□□□□ -0.2
PHF1O43189 AC025048.6-201ENST00000634326 1161 ntBASIC13.83□□□□□ -0.2
PHF1O43189 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PHF1O43189 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 AKAP8P1-201ENST00000434743 1349 ntBASIC13.83□□□□□ -0.2
PHF1O43189 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PHF1O43189 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PHF1O43189 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF1O43189 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 WASH6P-202ENST00000359512 1437 ntBASIC13.82□□□□□ -0.2
PHF1O43189 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PHF1O43189 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.82□□□□□ -0.2
PHF1O43189 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.82□□□□□ -0.2
PHF1O43189 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.82□□□□□ -0.2
PHF1O43189 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 IGHV3-62-201ENST00000520057 340 ntBASIC13.82□□□□□ -0.2
PHF1O43189 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 AL596325.1-201ENST00000563991 1082 ntBASIC13.82□□□□□ -0.2
PHF1O43189 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.82□□□□□ -0.2
PHF1O43189 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.82□□□□□ -0.2
PHF1O43189 MST1L-201ENST00000442552 2185 ntBASIC13.82□□□□□ -0.2
PHF1O43189 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF1O43189 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF1O43189 AC126177.1-201ENST00000547829 2218 ntBASIC13.82□□□□□ -0.2
PHF1O43189 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF1O43189 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.81□□□□□ -0.2
PHF1O43189 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PHF1O43189 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PHF1O43189 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PHF1O43189 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.81□□□□□ -0.2
PHF1O43189 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.81□□□□□ -0.2
PHF1O43189 UXT-AS1-201ENST00000590504 1525 ntBASIC13.81□□□□□ -0.2
PHF1O43189 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PHF1O43189 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
PHF1O43189 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms