Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LYRM9A8MSI8 AC022188.1-201ENST00000620960 1664 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 TSSK5P-201ENST00000423978 907 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC009477.1-201ENST00000452936 217 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC004890.2-204ENST00000481968 304 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 TIMM17BP1-201ENST00000545713 516 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 HNRNPUP1-201ENST00000554987 333 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC025048.3-201ENST00000590609 569 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AL390955.2-201ENST00000603032 514 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AL355385.1-201ENST00000606123 409 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AL844908.2-201ENST00000609461 460 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 AC005702.4-201ENST00000618393 416 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 Z97205.2-201ENST00000564697 1639 ntBASIC11.33□□□□□ -0.6
LYRM9A8MSI8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LYRM9A8MSI8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYRM9A8MSI8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms