Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 BNIP3P1-202ENST00000550043 1585 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AC100757.3-201ENST00000622361 1406 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 RPL37AP1-201ENST00000412502 279 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL080243.2-201ENST00000418783 582 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PHKG1P2-201ENST00000457537 863 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AC011467.4-201ENST00000594891 528 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AL450472.2-201ENST00000603663 1156 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMIM9A6NGZ8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 AC092580.3-201ENST00000430932 139 ntBASIC11.54□□□□□ -0.56
SMIM9A6NGZ8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms