Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 AC134407.2-201ENST00000625089 1978 ntBASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 AC232323.1-201ENST00000540724 2099 ntBASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 REXO1L5P-201ENST00000622260 2098 ntBASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 RBM17P3-201ENST00000417687 1192 ntBASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MEIS3P1A6NDR6 AC015656.1-201ENST00000624209 3578 ntBASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 AC011477.6-201ENST00000604980 1927 ntBASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MEIS3P1A6NDR6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms