Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 WASH3P-207ENST00000560956 1394 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 FO538757.1-201ENST00000623083 1397 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ATP5G2P1-201ENST00000433580 426 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 AC109635.5-201ENST00000533593 962 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 BEND3P1-201ENST00000421591 1944 ntBASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.88□□□□□ -0.03
TCRBV3S1A0A5B6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 ACE3P-201ENST00000423435 1973 ntBASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 AC092119.3-201ENST00000612618 583 ntBASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 AC027601.5-201ENST00000624065 2482 ntBASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.87□□□□□ -0.03
TCRBV3S1A0A5B6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV3S1A0A5B6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms