Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC092384.3-202ENST00000564646 2873 ntBASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV5-4A0A0C4DH59 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 AL589987.1-201ENST00000453380 819 ntBASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC004790.1-201ENST00000612686 536 ntBASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV5-4A0A0C4DH59 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC112693.3-201ENST00000624819 1983 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 UGT1A2P-201ENST00000454886 866 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 KRT18P43-201ENST00000469825 1281 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 TIMM17BP1-201ENST00000545713 516 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC000095.1-201ENST00000603208 874 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AJ011932.1-201ENST00000621707 465 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC084364.1-201ENST00000551967 1556 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 AL121723.1-201ENST00000445194 1519 ntBASIC15.53■□□□□ 0.08
TRBV5-4A0A0C4DH59 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms