Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 MIR4751-201ENST00000578027 74 ntBASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AC073439.1-201ENST00000624121 1774 ntBASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 AP001282.1-201ENST00000531301 1499 ntBASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 OR2I1P-209ENST00000641730 5365 ntBASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 MIR4321-201ENST00000592276 80 ntBASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TRAV5A0A0B4J249 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.4□□□□□ -0.43
TRAV5A0A0B4J249 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AGAP7P-201ENST00000582299 2062 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms