Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AL009183.1-201ENST00000603760 355 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC023908.3-201ENST00000564211 3047 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 MIR4751-201ENST00000578027 74 ntBASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2D4Q9Y2X8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
UBE2D4Q9Y2X8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms