Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AC105250.1-201ENST00000509378 2057 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 KRT18P64-201ENST00000434946 1219 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SLED1-202ENST00000512051 380 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AL355385.1-201ENST00000606123 409 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AF228730.6-201ENST00000641497 218 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AC084121.3-201ENST00000641716 218 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AL139384.1-201ENST00000612143 3047 ntBASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHA4Q9UN74 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 AC127383.1-201ENST00000444697 1800 ntBASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 INGX-202ENST00000489074 768 ntBASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA4Q9UN74 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 AC020658.6-201ENST00000623564 1870 ntBASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA4Q9UN74 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms