Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 AC098831.1-202ENST00000438821 336 ntBASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHGB4Q9UN71 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AC005840.4-201ENST00000541242 2494 ntBASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AC007064.4-201ENST00000637740 555 ntBASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AC007191.1-201ENST00000623179 2995 ntBASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGB4Q9UN71 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGB4Q9UN71 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms