Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AL158070.2-201ENST00000623713 1621 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AL807761.2-201ENST00000422849 729 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC142086.5-202ENST00000562500 217 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 SIGLEC18P-201ENST00000602271 909 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 KRT8P31-201ENST00000504812 1408 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 AP000593.2-201ENST00000542775 1433 ntBASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC24.35■■□□□ 1.49
RIMBP3Q9UFD9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 MIR566-201ENST00000385187 94 ntBASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 MESTP3-201ENST00000503460 968 ntBASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AC005962.1-201ENST00000584100 773 ntBASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AP005212.2-201ENST00000584979 510 ntBASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RIMBP3Q9UFD9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 HCG18-241ENST00000602290 821 ntTSL 2 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 AP001184.1-201ENST00000637936 376 ntBASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RIMBP3Q9UFD9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RIMBP3Q9UFD9 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RIMBP3Q9UFD9 ABALON-201ENST00000629058 1903 ntBASIC24.33■■□□□ 1.48
RIMBP3Q9UFD9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC24.33■■□□□ 1.48
RIMBP3Q9UFD9 AC015909.3-201ENST00000572855 1794 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 NME4-203ENST00000397722 1232 ntTSL 2 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 DUX4L46-201ENST00000566845 751 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC018846.1-201ENST00000568231 183 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AL645937.2-201ENST00000396808 931 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms