Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 ZNF890P-202ENST00000530367 1156 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AF228730.6-201ENST00000641497 218 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AC084121.3-201ENST00000641716 218 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AC105233.6-201ENST00000642093 218 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 AC092384.3-202ENST00000564646 2873 ntBASIC18.87■□□□□ 0.61
CLIP2Q9UDT6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 DBET-201ENST00000630918 3363 ntBASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 AL691432.1-201ENST00000596308 1422 ntBASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 PIN1P1-201ENST00000412108 996 ntBASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 MIR6069-201ENST00000620069 79 ntBASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 AC104640.1-201ENST00000562617 2109 ntBASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CLIP2Q9UDT6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 GNAQP1-201ENST00000444815 1067 ntBASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 CRB3P1-201ENST00000449338 276 ntBASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.85■□□□□ 0.61
CLIP2Q9UDT6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms