Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC108073.2-201ENST00000464002 357 ntBASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCDHB16Q9NRJ7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC087386.2-201ENST00000623212 4637 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC010491.1-201ENST00000563101 2797 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC245100.5-201ENST00000452108 331 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 KRT18P34-201ENST00000488218 1270 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AP002469.2-201ENST00000531724 424 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 AL031008.1-201ENST00000619963 541 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCDHB16Q9NRJ7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 HAUS4P1-201ENST00000406739 1145 ntBASIC13.92□□□□□ -0.18
PCDHB16Q9NRJ7 HMGA1P7-201ENST00000406908 502 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms