Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC074338.1-201ENST00000416825 156 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC023310.3-201ENST00000557027 670 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC100756.1-201ENST00000562736 682 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC138749.3-201ENST00000567691 622 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC116165.1-201ENST00000611806 668 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 Z97205.2-201ENST00000564697 1639 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 AL391005.1-201ENST00000623953 2435 ntBASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VAT1LQ9HCJ6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 AC112504.1-201ENST00000623415 1841 ntBASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VAT1LQ9HCJ6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 TPRX2P-201ENST00000535362 881 ntBASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 CHCHD2P3-201ENST00000603038 451 ntBASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 AL662799.1-202ENST00000614205 422 ntBASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.39■□□□□ 0.53
VAT1LQ9HCJ6 AL607033.1-201ENST00000623900 1599 ntBASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VAT1LQ9HCJ6 KRT18P64-201ENST00000434946 1219 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms