Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A2Q9BY10 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AC124067.4-201ENST00000519691 2379 ntBASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AC099336.1-201ENST00000417053 1171 ntBASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 RPL7P3-201ENST00000441388 714 ntBASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AL583810.1-201ENST00000553344 1045 ntBASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A2Q9BY10 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 CSF2RBP1-201ENST00000447905 391 ntBASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 FTH1P14-201ENST00000482930 551 ntBASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AC015910.1-201ENST00000579400 975 ntBASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AC093813.1-201ENST00000605066 256 ntBASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 AC069224.1-201ENST00000566372 1715 ntBASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC46A2Q9BY10 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms