Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AL691432.1-201ENST00000596308 1422 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 FO393414.2-201ENST00000405153 598 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 HAUS4P1-201ENST00000406739 1145 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 SERBP1P5-201ENST00000510079 1181 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ZNF890P-202ENST00000530367 1156 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AC135586.1-201ENST00000539323 574 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AC009407.1-201ENST00000568958 598 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AC004233.3-201ENST00000607794 1269 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AC008738.7-201ENST00000609744 511 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP3Q9BWW4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 MIR661-201ENST00000384842 89 ntBASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC190387.1-201ENST00000551683 408 ntBASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC126755.1-201ENST00000525846 6405 ntBASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP3Q9BWW4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms