Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 BAALC-201ENST00000297574 801 ntTSL 3 BASIC10.59□□□□□ -0.71
LITAFQ99732 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
LITAFQ99732 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 BX005266.1-201ENST00000473402 457 ntBASIC10.59□□□□□ -0.71
LITAFQ99732 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.59□□□□□ -0.71
LITAFQ99732 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.59□□□□□ -0.71
LITAFQ99732 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.59□□□□□ -0.71
LITAFQ99732 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LITAFQ99732 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.59□□□□□ -0.71
LITAFQ99732 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
LITAFQ99732 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 AC099521.3-201ENST00000624251 2938 ntBASIC10.58□□□□□ -0.72
LITAFQ99732 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 PTCHD3P3-201ENST00000403073 906 ntBASIC10.58□□□□□ -0.72
LITAFQ99732 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC10.58□□□□□ -0.72
LITAFQ99732 TSPY20P-201ENST00000450910 630 ntBASIC10.58□□□□□ -0.72
LITAFQ99732 MINOS1P3-201ENST00000457048 203 ntBASIC10.58□□□□□ -0.72
LITAFQ99732 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 MIR4321-201ENST00000592276 80 ntBASIC10.58□□□□□ -0.72
LITAFQ99732 GZMM-202ENST00000592501 941 ntTSL 3 BASIC10.58□□□□□ -0.72
LITAFQ99732 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LITAFQ99732 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.58□□□□□ -0.72
LITAFQ99732 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LITAFQ99732 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms