Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL13Q99616 AZGP1P1-201ENST00000411909 902 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 PHKG1P2-201ENST00000457537 863 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 SERBP1P3-201ENST00000459980 809 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL13Q99616 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL13Q99616 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 AC005498.2-205ENST00000593218 784 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 AL390955.2-201ENST00000603032 514 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 AL450472.2-201ENST00000603663 1156 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 MIR6069-201ENST00000620069 79 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
CCL13Q99616 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 FO393414.2-201ENST00000405153 598 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL13Q99616 AC241585.1-201ENST00000433527 519 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL13Q99616 AL512638.1-201ENST00000457493 794 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL13Q99616 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL13Q99616 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL13Q99616 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL13Q99616 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCL13Q99616 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 AL590560.3-201ENST00000623350 461 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 AL033527.5-202ENST00000641632 1098 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 AC126755.1-201ENST00000525846 6405 ntBASIC13.32□□□□□ -0.28
CCL13Q99616 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL13Q99616 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL13Q99616 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCL13Q99616 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL13Q99616 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL13Q99616 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL13Q99616 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms