Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 DMBT1P1-203ENST00000636837 4628 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 AC073621.1-201ENST00000392730 636 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 MRPL3P1-201ENST00000400109 1033 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 PAWRP1-201ENST00000451083 565 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 DUX4L17-201ENST00000557360 1267 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 FAM215A-202ENST00000632077 792 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 AL805961.1-202ENST00000641562 540 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 ST20-AS1-201ENST00000560255 4223 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 GRK6P1-201ENST00000400595 1711 ntBASIC13.5□□□□□ -0.25
CLCC1Q96S66 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLCC1Q96S66 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.5□□□□□ -0.25
CLCC1Q96S66 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 AL031284.1-201ENST00000419297 478 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 KRT18P27-201ENST00000427733 1299 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 SLC25A6P2-201ENST00000497974 877 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 AC079776.4-201ENST00000511039 504 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 AC104692.2-201ENST00000603054 253 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 GGTLC5P-201ENST00000617623 998 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 AF228730.7-201ENST00000641842 219 ntBASIC13.49□□□□□ -0.25
CLCC1Q96S66 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLCC1Q96S66 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.49□□□□□ -0.25
CLCC1Q96S66 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCC1Q96S66 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLCC1Q96S66 AC007686.3-201ENST00000619017 3487 ntBASIC13.48□□□□□ -0.25
CLCC1Q96S66 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms