Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 KRT18P28-201ENST00000453838 1332 ntBASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 FO538757.1-201ENST00000623083 1397 ntBASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSPG4P5Q96PW8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC087481.3-201ENST00000602886 1894 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 METTL21AP1-201ENST00000438852 635 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 TEX28P1-201ENST00000613479 1221 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 TEX28P2-201ENST00000617764 1221 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 TMBIM7P-203ENST00000641617 1718 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 AC104640.1-201ENST00000562617 2109 ntBASIC16.36■□□□□ 0.21
CSPG4P5Q96PW8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AC107890.1-201ENST00000422478 521 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 TARDBPP1-201ENST00000442013 1203 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AC140878.1-201ENST00000565277 250 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AC073592.8-201ENST00000624126 511 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AL033527.5-202ENST00000641632 1098 ntBASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CSPG4P5Q96PW8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms