Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.1□□□□□ -0.15
APH1AQ96BI3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 PHKG1P2-201ENST00000457537 863 ntBASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC092364.2-202ENST00000597012 1073 ntBASIC14.1□□□□□ -0.15
APH1AQ96BI3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.1□□□□□ -0.15
APH1AQ96BI3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APH1AQ96BI3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 AC024909.3-201ENST00000611513 2257 ntBASIC14.1□□□□□ -0.15
APH1AQ96BI3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.1□□□□□ -0.15
APH1AQ96BI3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 AL603832.2-201ENST00000566195 2125 ntBASIC14.09□□□□□ -0.15
APH1AQ96BI3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 FAM8A3P-201ENST00000427218 844 ntBASIC14.09□□□□□ -0.15
APH1AQ96BI3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 AC044860.1-202ENST00000559481 777 ntBASIC14.09□□□□□ -0.15
APH1AQ96BI3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APH1AQ96BI3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APH1AQ96BI3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
APH1AQ96BI3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APH1AQ96BI3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.08□□□□□ -0.15
APH1AQ96BI3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
APH1AQ96BI3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APH1AQ96BI3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.08□□□□□ -0.15
APH1AQ96BI3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APH1AQ96BI3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APH1AQ96BI3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APH1AQ96BI3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.08□□□□□ -0.16
APH1AQ96BI3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.08□□□□□ -0.16
APH1AQ96BI3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
APH1AQ96BI3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.08□□□□□ -0.16
APH1AQ96BI3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APH1AQ96BI3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
APH1AQ96BI3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms