Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 KRT8P37-201ENST00000451609 1420 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 AC069224.1-201ENST00000566372 1715 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 KRT8P12-202ENST00000472924 1397 ntBASIC16.66■□□□□ 0.26
RNF34Q969K3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF34Q969K3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RNF34Q969K3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF34Q969K3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 HMGN1P19-201ENST00000436976 333 ntBASIC16.66■□□□□ 0.26
RNF34Q969K3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF34Q969K3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF34Q969K3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF34Q969K3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF34Q969K3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF34Q969K3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF34Q969K3 AC008894.3-201ENST00000624324 3103 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF34Q969K3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 AC092580.3-201ENST00000430932 139 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 AC241585.1-201ENST00000433527 519 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF34Q969K3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF34Q969K3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF34Q969K3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF34Q969K3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF34Q969K3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF34Q969K3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 TEX28P1-201ENST00000613479 1221 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF34Q969K3 TEX28P2-201ENST00000617764 1221 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 MIR6069-201ENST00000620069 79 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 AC018695.7-201ENST00000624587 2492 ntBASIC16.65■□□□□ 0.26
RNF34Q969K3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RNF34Q969K3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF34Q969K3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF34Q969K3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF34Q969K3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF34Q969K3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF34Q969K3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF34Q969K3 AC100757.3-201ENST00000622361 1406 ntBASIC16.64■□□□□ 0.25
RNF34Q969K3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF34Q969K3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF34Q969K3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF34Q969K3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms