Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 AL031731.1-201ENST00000642131 2094 ntBASIC16.81■□□□□ 0.28
ATP2A3Q93084 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 BTBD7P1-201ENST00000447253 1453 ntBASIC16.8■□□□□ 0.28
ATP2A3Q93084 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 RN7SL692P-201ENST00000464677 288 ntBASIC16.8■□□□□ 0.28
ATP2A3Q93084 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AL596325.1-201ENST00000563991 1082 ntBASIC16.8■□□□□ 0.28
ATP2A3Q93084 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP2A3Q93084 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A3Q93084 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 AC135586.1-201ENST00000539323 574 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 AC061975.2-201ENST00000581722 295 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.79■□□□□ 0.28
ATP2A3Q93084 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A3Q93084 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A3Q93084 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms