Protein–RNA interactions for Protein: Q8WYL5

SSH1, Protein phosphatase Slingshot homolog 1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1Q8WYL5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSH1Q8WYL5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.24■□□□□ 0.83
SSH1Q8WYL5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 AC013268.4-201ENST00000637413 2228 ntBASIC20.23■□□□□ 0.83
SSH1Q8WYL5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 AC073347.1-201ENST00000421633 2643 ntBASIC20.23■□□□□ 0.83
SSH1Q8WYL5 AC114501.2-201ENST00000439631 535 ntBASIC20.23■□□□□ 0.83
SSH1Q8WYL5 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSH1Q8WYL5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 BASP1P1-201ENST00000430708 665 ntBASIC20.22■□□□□ 0.83
SSH1Q8WYL5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 AL589987.1-201ENST00000453380 819 ntBASIC20.22■□□□□ 0.83
SSH1Q8WYL5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.22■□□□□ 0.83
SSH1Q8WYL5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 MIR770-201ENST00000390219 98 ntBASIC20.21■□□□□ 0.83
SSH1Q8WYL5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.21■□□□□ 0.83
SSH1Q8WYL5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.21■□□□□ 0.83
SSH1Q8WYL5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.2■□□□□ 0.83
SSH1Q8WYL5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSH1Q8WYL5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SSH1Q8WYL5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms