Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 AC002056.1-201ENST00000395613 760 ntBASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 AL645939.2-201ENST00000427340 991 ntBASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 AP001005.1-201ENST00000571755 1248 ntBASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 AC064836.3-201ENST00000607928 673 ntBASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC44A1Q8WWI5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC44A1Q8WWI5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AC023908.3-201ENST00000564211 3047 ntBASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AL136982.4-201ENST00000437689 1740 ntBASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 KRT18P2-201ENST00000447938 1258 ntBASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AC099522.2-201ENST00000607001 744 ntBASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 AC148477.4-201ENST00000613430 1793 ntBASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC44A1Q8WWI5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 LINC00528-201ENST00000600723 2160 ntBASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 AC074386.1-202ENST00000463561 864 ntBASIC15.94■□□□□ 0.14
SLC44A1Q8WWI5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms