Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
U2AF1L4Q8WU68 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 AC006449.5-201ENST00000610658 2098 ntBASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 FER1L4-210ENST00000615531 5998 ntBASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 YBX1P6-201ENST00000442962 1002 ntBASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 AC106872.11-201ENST00000605838 421 ntBASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.15■□□□□ 0.5
U2AF1L4Q8WU68 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
U2AF1L4Q8WU68 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 SLC25A24P2-201ENST00000415059 510 ntBASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AC020765.3-201ENST00000613051 740 ntBASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2AF1L4Q8WU68 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 AC006277.1-201ENST00000624348 1610 ntBASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.13■□□□□ 0.49
U2AF1L4Q8WU68 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms