Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 TREML5P-201ENST00000421694 576 ntBASIC16.95■□□□□ 0.3
LMO3Q8TAP4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 ZNF890P-202ENST00000530367 1156 ntBASIC16.95■□□□□ 0.3
LMO3Q8TAP4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 LINC01115-203ENST00000606068 577 ntBASIC16.95■□□□□ 0.3
LMO3Q8TAP4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LMO3Q8TAP4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AC100757.3-201ENST00000622361 1406 ntBASIC16.94■□□□□ 0.3
LMO3Q8TAP4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.94■□□□□ 0.3
LMO3Q8TAP4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 AL596257.1-201ENST00000641463 2694 ntBASIC16.93■□□□□ 0.3
LMO3Q8TAP4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.93■□□□□ 0.3
LMO3Q8TAP4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms